Helper Module for Deep Learning.

pynet usage examples¶

Contents

Structure use cases
Classification use cases
Genetic use cases
Registration use cases
rfMRI use cases
Segmentations use cases
spherical use cases
Transfer learning use cases
Hyper parameters tuning use cases
Variational Autoencoder (VAE) use cases

Structure use cases ¶

Introductory examples that teach how to use the pynet helpers.

../_images/sphx_glr_dataset_thumb.png — pynet dataset helpers overview¶

../_images/sphx_glr_network_thumb.png — pynet network helpers overview¶

../_images/sphx_glr_preprocessing_thumb.png — pynet data preprocessing¶

../_images/sphx_glr_optim_thumb.png — pynet optim helpers overview¶

../_images/sphx_glr_augmentation_thumb.png — pynet data augmentation overview¶

Classification use cases ¶

../_images/sphx_glr_class_activation_map_thumb.png — pynet: class activation map¶

../_images/sphx_glr_multi_modal_orientation_thumb.png — pynet: multi modal slice orientation prediction¶

../_images/sphx_glr_graph_connectome_thumb.png — pynet: predicting autism¶

../_images/sphx_glr_predicting_autism_thumb.png — pynet: predicting autism¶

../_images/sphx_glr_self_supervised_clustering_thumb.png — pynet: self supervised clustering¶

Genetic use cases ¶

../_images/sphx_glr_height_bb_prediction_thumb.png — Genome Wide Association with DL for standing height¶

../_images/sphx_glr_pathway_factorized_latent_space_thumb.png — Pathway factorized latent space¶

../_images/sphx_glr_genomic_prediction_thumb.png — Practical Deep Learning for Genomic Prediction¶

Registration use cases ¶

../_images/sphx_glr_deformation_field_estimation_thumb.png — Practical Deep Learning for Image Registration¶

rfMRI use cases ¶

../_images/sphx_glr_ADHD_dense_fbn_thumb.png — pynet dense fonctional brain networks extraction¶

../_images/sphx_glr_ADHD_ResAE_fbn_thumb.png — pynet deep conv fonctional brain networks extraction¶

Segmentations use cases ¶

../_images/sphx_glr_sementic_segmentation_thumb.png — pynet echocardiography segmentation¶

../_images/sphx_glr_echocardiography_thumb.png — pynet echocardiography segmentation¶

../_images/sphx_glr_tumor_thumb.png — pynet metastasis tumor segmentation¶

spherical use cases ¶

../_images/sphx_glr_icosahedron_unet_segmentation_thumb.png — pynet: icosahedron UNet segmentation¶

Transfer learning use cases ¶

../_images/sphx_glr_multi_modal_orientation_thumb1.png — pynet: transfer learning¶

Hyper parameters tuning use cases ¶

../_images/sphx_glr_breast_cancer_thumb.png — pynet: hyper parameters tuning¶

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